PGF

Across TCGA cell cohorts, PGF RNA expression is significantly associated with the RNA expression of many other genes, with 5,741 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible PGF-associated genes across cancer lineages are PTX3, FSCN1, and SH2B3. Each is linked with PGF in more than 4 cancer types. Because this analysis shows association rather than direction, both PGF-to-partner and partner-to-PGF results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PGF versus PTX3 in BREAST, with a Pearson correlation of 0.48.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PGF→partner) and Y-score (partner→PGF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BREAST	PTX3 →	+2.196	+1.920	<.001	<.001	3	5
BREAST	FSCN1 →	+2.544	+1.521	<.001	<.001	3	5
BREAST	SH2B3 →	+1.662	+2.263	<.001	.001	3	5
URINARY_TRACT	FKBP1B →	+1.716	+1.828	<.001	<.001	2	5
BREAST	IRAK2 →	+1.654	+2.175	<.001	.002	2	5
BLOOD_Lymphoma	FMNL3 →	+1.700	+0.845	<.001	<.001	2	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,741 associations by consensus.

PGF vs PTX3 — BREAST

Explore this scatter interactively →