PGBD4P3

Across TCGA patient cohorts, PGBD4P3 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,230 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PGBD4P3-associated proteins across cancer lineages are NFIA, SP4_S46, and TSC22D3. Each is linked with PGBD4P3 in more than 3 cancer types. Because this analysis shows association rather than direction, both PGBD4P3-to-partner and partner-to-PGBD4P3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PGBD4P3 versus NFIA in GBM, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PGBD4P3→partner) and Y-score (partner→PGBD4P3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	NFIA →	+0.372	+0.455	<.001	<.001	3	4
GBM	SP4_S46 →	+0.535	+0.624	<.001	<.001	3	3
BRCA	TSC22D3 →	+0.333	+0.081	.002	<.001	3	3
GBM	PLAUR →	-0.467	-0.399	.007	.002	3	3
GBM	RPL7 →	-0.369	-0.397	<.001	.001	3	3
GBM	MGAT2 →	-0.361	-0.452	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,230 associations by consensus.

PGBD4P3 vs NFIA — GBM

Explore this scatter interactively →