Across TCGA patient cohorts, PGBD2 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,398 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PGBD2-associated proteins across cancer lineages are GATAD2B, RNPEP, and BROX. Each is linked with PGBD2 in more than 6 cancer types. Because this analysis shows association rather than direction, both PGBD2-to-partner and partner-to-PGBD2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PGBD2→partner) and Y-score (partner→PGBD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	GATAD2B →	+0.370	+0.397	<.001	<.001	3	7
BRCA	RNPEP →	+0.289	+0.508	.001	<.001	3	6
UCEC	BROX →	+0.579	+0.763	<.001	<.001	3	6
UCEC	IRF2BP2 →	+0.312	+0.793	<.001	<.001	3	6
GBM	HNRNPU →	+0.250	+0.278	<.001	<.001	3	6
GBM	PHF14 →	+0.253	+0.273	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,398 associations by consensus.

Exploration

PGBD2 survival (RNA) · tumor vs normal (RNA) · all PGBD2 data types