PGBD1

Across TCGA patient cohorts, PGBD1 RNA expression is significantly associated with the protein abundance of many other proteins, with 21,046 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PGBD1-associated proteins across cancer lineages are ZKSCAN8_S193, IRF2BP1, and CEP170. Each is linked with PGBD1 in more than 6 cancer types. Because this analysis shows association rather than direction, both PGBD1-to-partner and partner-to-PGBD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PGBD1 versus ZKSCAN8_S193 in LSCC, with a Pearson correlation of 0.48.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PGBD1→partner) and Y-score (partner→PGBD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	ZKSCAN8_S193 →	+0.690	+1.095	<.001	<.001	3	7
GBM	IRF2BP1 →	+0.310	+0.475	<.001	<.001	3	7
UCEC	CEP170 →	+0.321	+0.600	<.001	.002	3	6
OV	CLINT1 →	-0.274	-0.914	<.001	<.001	3	6
OV	GALE →	-0.410	-0.625	<.001	<.001	3	6
OV	GNL1 →	+0.281	+0.976	.006	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 21,046 associations by consensus.

PGBD1 vs ZKSCAN8_S193 — LSCC

Explore this scatter interactively →