PGAM3P

Across TCGA patient cohorts, PGAM3P RNA expression is significantly associated with the go_rna of many other GO terms, with 5,839 significant associations in total. STAD shows the largest number of these associations.

The most reproducible PGAM3P-associated GO terms across cancer lineages are Regulation of polysaccharide metabolic process, Vesicle-mediated transport in synapse, and Regulation of double-strand break repair via homologous recombination. Each is linked with PGAM3P in more than 5 cancer types. Because this analysis shows association rather than direction, both PGAM3P-to-partner and partner-to-PGAM3P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of polysaccharide metabolic process grouped by PGAM3P-low versus PGAM3P-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PGAM3P→partner) and Y-score (partner→PGAM3P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of polysaccharide metabolic process →	+0.076	+0.063	<.001	<.001	3	5
ESCA	Vesicle-mediated transport in synapse →	+0.114	+0.161	<.001	.004	3	5
ESCA	Regulation of double-strand break repair via homologous recombination →	+0.157	+0.143	<.001	.008	2	6
STAD	Positive regulation of DNA replication →	+0.090	+0.074	<.001	<.001	3	5
STAD	Pigment granule organization →	+0.092	+0.074	<.001	<.001	3	5
STAD	Protein N-linked glycosylation →	+0.089	+0.069	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,839 associations by consensus.

Regulation of polysaccharide metabolic process by PGAM3P expression — STAD

Explore this box plot interactively →