PGAM1P9

Across TCGA patient cohorts, PGAM1P9 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,027 significant associations in total. STAD shows the largest number of these associations.

The most reproducible PGAM1P9-associated GO terms across cancer lineages are Endoplasmic reticulum to Golgi vesicle-mediated transport, Retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum, and Regeneration. Each is linked with PGAM1P9 in more than 8 cancer types. Because this analysis shows association rather than direction, both PGAM1P9-to-partner and partner-to-PGAM1P9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endoplasmic reticulum to Golgi vesicle-mediated transport grouped by PGAM1P9-low versus PGAM1P9-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PGAM1P9→partner) and Y-score (partner→PGAM1P9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Endoplasmic reticulum to Golgi vesicle-mediated transport →	+0.037	+0.074	.001	.001	2	8
TGCT	Retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum →	+0.051	+0.018	.006	.005	2	8
ESCA	Regeneration →	+0.036	+0.045	.003	.001	1	9
SARC	Pigment metabolic process →	+0.022	+0.021	<.001	<.001	2	8
COAD	Vesicle budding from membrane →	+0.042	+0.057	<.001	.002	3	7
TGCT	Signal transduction in response to DNA damage →	+0.033	+0.014	.007	.003	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,027 associations by consensus.

Endoplasmic reticulum to Golgi vesicle-mediated transport by PGAM1P9 expression — STAD

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