PFDN6

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, PFDN6 mass-spec protein is linked to patient survival in 6 of 34 cancer types, making it a survival-associated PFDN6 data layer compared with 28 for mass-spec protein and 1 for mutation status.

The strongest signal is observed in glioblastoma multiforme (GBM), where higher PFDN6 mass-spec protein is associated with better overall survival. In most high-consensus cancer types, elevated PFDN6 expression acts as an unfavorable survival marker, although some lineages such as GBM and PDAC show a favorable association.

GBM, CCRCC, and HNSC are the cancer types where PFDN6 mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
GBMOSQuartileAll0.9640.689.0059view →
CCRCCDFSTertileAll0.6160.851.0058view →
HNSCOSTertileAll0.9381.000.0178view →
LSCCDFSTertileIII,IV0.6270.980.0118view →
PDACDFSQuartileIII,IV0.8200.439.0423view →
LUADDFSMedianAll0.4800.748.0032view →
Pink = unfavorable, green = favorable. Showing the 6 strongest of 6 lineages.

Exploration