PDZRN3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDZRN3 RNA expression is significantly associated with the protein abundance of many other proteins, with 19,510 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PDZRN3-associated proteins across cancer lineages are PDZRN3_S774, CNN3, and RSU1. Each is linked with PDZRN3 in more than 9 cancer types. Because this analysis shows association rather than direction, both PDZRN3-to-partner and partner-to-PDZRN3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PDZRN3 versus PDZRN3_S774 in OV, with a Pearson correlation of 0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PDZRN3→partner) and Y-score (partner→PDZRN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVPDZRN3_S774 →+0.836+0.725.002.006310
LSCCCNN3 →+0.669+0.895<.001<.00139
BRCARSU1 →+0.385+0.786<.001<.00139
BRCAILK →+0.431+0.794<.001<.00139
CCRCCPDZRN3_S848 →+1.345+1.324<.001<.00139
BRCATLN2 →+0.646+1.038<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,510 associations by consensus.

PDZRN3 vs PDZRN3_S774 — OV

Per-sample scatter of PDZRN3 vs PDZRN3_S774 in OV (Pearson r = 0.32).

Explore this scatter interactively →

Exploration