PDZRN3

Across TCGA cell cohorts, PDZRN3 RNA expression is significantly associated with the RNA expression of many other genes, with 8,691 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible PDZRN3-associated genes across cancer lineages are FAM222A, RAB3A, and PLCG1. Each is linked with PDZRN3 in more than 4 cancer types. Because this analysis shows association rather than direction, both PDZRN3-to-partner and partner-to-PDZRN3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PDZRN3 versus FAM222A in LUNG_SCLC, with a Pearson correlation of 0.48.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PDZRN3→partner) and Y-score (partner→PDZRN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_SCLC	FAM222A →	+1.584	+2.495	<.001	.001	3	5
SKIN	RAB3A →	+1.062	+1.426	<.001	<.001	3	5
SOFT_TISSUE	PLCG1 →	+1.327	+2.807	<.001	<.001	3	5
OVARY	PELI1 →	+1.201	+0.710	<.001	<.001	3	4
BREAST	LARGE1 →	+1.822	+1.336	<.001	<.001	3	4
BLOOD_Lymphoma	IL15RA →	-2.416	-1.094	<.001	<.001	2	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,691 associations by consensus.

PDZRN3 vs FAM222A — LUNG_SCLC

Explore this scatter interactively →