PDLIM3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PDLIM3 RNA expression is significantly associated with the protein abundance of many other proteins, with 20,876 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible PDLIM3-associated proteins across cancer lineages are PDLIM3_S89, PDLIM3_S93, and TAGLN. Each is linked with PDLIM3 in more than 9 cancer types. Because this analysis shows association rather than direction, both PDLIM3-to-partner and partner-to-PDLIM3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PDLIM3 versus PDLIM3_S89 in HNSC, with a Pearson correlation of 0.65.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PDLIM3→partner) and Y-score (partner→PDLIM3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCPDLIM3_S89 →+1.345+1.727<.001<.001310
HNSCPDLIM3_S93 →+1.615+1.939<.001<.001310
OVTAGLN →+1.454+1.886<.001<.00139
BRCATHBS3 →+0.737+1.335<.001<.00139
UCECCALD1 →+1.213+1.850<.001<.00139
OVCCDC80 →+1.315+1.870<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 20,876 associations by consensus.

PDLIM3 vs PDLIM3_S89 — HNSC

Per-sample scatter of PDLIM3 vs PDLIM3_S89 in HNSC (Pearson r = 0.65).

Explore this scatter interactively →

Exploration