PDE8B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PDE8B mutation is significantly associated with the RNA expression of many other genes, with 518 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible PDE8B-associated genes across cancer lineages are HJV, TRPC5OS, and KRT71. Each is linked with PDE8B in more than 1 cancer types. Because this analysis shows association rather than direction, both PDE8B-to-partner and partner-to-PDE8B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HJV grouped by PDE8B-low versus PDE8B-high in URINARY_TRACT.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PDE8B→partner) and Y-score (partner→PDE8B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
URINARY_TRACTHJV →+0.015+3.584.004.00931
URINARY_TRACTTRPC5OS →+0.031+3.584.008.00931
BLOOD_LymphomaKRT71 →+0.007+4.058<.001.00931
LUNG_NSCLC_LUADCOX4I2 →+0.050+3.813<.001.00131
LUNG_NSCLC_LUADIL1F10 →+0.118+2.989.007.00731
LUNG_NSCLC_LUADTEX33 →+0.015+3.944<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 518 associations by consensus.

HJV by PDE8B expression — URINARY_TRACT

Box plot of HJV in PDE8B-low vs PDE8B-high samples in URINARY_TRACT.

Explore this box plot interactively →

Exploration