PDE1B

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, PDE1B RNA differs between tumor and matched normal tissue in 13 of 18 cancer types tested, making tumor–normal expression one of PDE1B’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where PDE1B RNA is more highly expressed in tumor relative to normal tissue. In most cancer types PDE1B is over-expressed in tumor, although a few such as KICH and LUAD show the opposite, repressed pattern.

KIRC, KICH, and LUAD are the cancer types where PDE1B tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in PDE1B RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCFemaleAll+1.443<.00112view →
KICHMaleAll−1.354<.00110view →
LUADMaleAll−1.253<.0019view →
UCECAllIII,IV−2.324<.0018view →
BLCAMaleIV−2.255.0018view →
LUSCFemaleII,III,IV−1.582<.0018view →
COADFemaleIII,IV−0.712<.0018view →
BRCAAllII,III,IV−1.057<.0016view →
READFemaleAll−1.101.0072view →
LIHCFemaleII,III,IV+0.500.0382view →
PRADAllAll−0.360<.0012view →
STADAllAll−0.601.0301view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 13 lineages.

PDE1B–KIRC

Tumor-vs-normal expression box plot for PDE1B RNA in KIRC.

Open the KIRC breakdown →

Exploration