PDCD4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PDCD4 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,745 significant associations in total. BREAST shows the largest number of these associations.

The most reproducible PDCD4-associated GO terms across cancer lineages are Epicardium-derived cardiac fibroblast cell differentiation, Epicardium-derived cardiac fibroblast cell development, and Cardiac fibroblast cell differentiation. Each is linked with PDCD4 in more than 14 cancer types. Because this analysis shows association rather than direction, both PDCD4-to-partner and partner-to-PDCD4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Epicardium-derived cardiac fibroblast cell differentiation grouped by PDCD4-low versus PDCD4-high in PANCREAS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PDCD4→partner) and Y-score (partner→PDCD4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASEpicardium-derived cardiac fibroblast cell differentiation →+0.346+1.071.004<.001315
PANCREASEpicardium-derived cardiac fibroblast cell development →+0.346+1.071.004<.001315
BLOOD_LymphomaCardiac fibroblast cell differentiation →+0.302+1.304<.001<.001315
BLOOD_LymphomaCardiac fibroblast cell development →+0.302+1.304<.001<.001315
LARGE_INTESTINENegative regulation of vascular associated smooth muscle cell differentiation →+0.202+0.840<.001.007314
BONENegative regulation of JUN kinase activity →+0.190+1.759<.001<.001314
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,745 associations by consensus.

Epicardium-derived cardiac fibroblast cell differentiation by PDCD4 expression — PANCREAS

Box plot of Epicardium-derived cardiac fibroblast cell differentiation in PDCD4-low vs PDCD4-high samples in PANCREAS.

Explore this box plot interactively →

Exploration