PDCD1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PDCD1 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,289 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible PDCD1-associated GO terms across cancer lineages are Negative regulation of mRNA processing, Microtubule bundle formation, and Regulation of T cell differentiation. Each is linked with PDCD1 in more than 5 cancer types. Because this analysis shows association rather than direction, both PDCD1-to-partner and partner-to-PDCD1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PDCD1→partner) and Y-score (partner→PDCD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaNegative regulation of mRNA processing →+0.088+1.129<.001.00236
BLOOD_LymphomaMicrotubule bundle formation →-0.029-1.006.007.00335
BLOOD_LeukemiaRegulation of T cell differentiation →+0.058+0.888<.001<.00135
BLOOD_LymphomaCytoplasmic translation →+0.061+1.178<.001<.00135
BLOOD_LymphomaNegative regulation of mRNA splicing, via spliceosome →+0.090+1.042<.001.00635
BLOOD_LymphomaRegulation of syncytium formation by plasma membrane fusion →+0.069+1.111.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,289 associations by consensus.

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