PCYT1B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PCYT1B protein abundance is significantly associated with the protein abundance of many other proteins, with 9,107 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PCYT1B-associated proteins across cancer lineages are ARMCX3, CORO2A, and CPVL. Each is linked with PCYT1B in more than 2 cancer types. Because this analysis shows association rather than direction, both PCYT1B-to-partner and partner-to-PCYT1B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCYT1B versus ARMCX3 in LSCC, with a Pearson correlation of 0.40.

protein abundance associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PCYT1B→partner) and Y-score (partner→PCYT1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCARMCX3 →+0.404+1.016<.001<.00132
GBMCORO2A →+0.502+0.334<.001<.00132
GBMCPVL →-0.594-0.400<.001<.00132
LSCCCRMP1_T509 →+0.896+0.731.001.00132
GBMCTSA →-0.423-0.487<.001<.00132
GBMCTSS →-0.623-0.409<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,107 associations by consensus.

PCYT1B vs ARMCX3 — LSCC

Per-sample scatter of PCYT1B vs ARMCX3 in LSCC (Pearson r = 0.40).

Explore this scatter interactively →

Exploration