PCSK7

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PCSK7 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,660 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible PCSK7-associated proteins across cancer lineages are BUD13_S325, DCPS, and VPS26B. Each is linked with PCSK7 in more than 3 cancer types. Because this analysis shows association rather than direction, both PCSK7-to-partner and partner-to-PCSK7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCSK7 versus BUD13_S325 in HNSC, with a Pearson correlation of 0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PCSK7→partner) and Y-score (partner→PCSK7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCBUD13_S325 →+0.345+0.563<.001<.00134
HNSCDCPS →+0.296+0.460<.001<.00134
BRCAVPS26B →+0.209+0.474.001<.00134
GBMPYGL →-0.415-0.191.005.00734
HNSCSHANK2_S67 →-1.293-0.553.001<.00133
HNSCSPTBN1_S2128 →+0.437+0.499.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,660 associations by consensus.

PCSK7 vs BUD13_S325 — HNSC

Per-sample scatter of PCSK7 vs BUD13_S325 in HNSC (Pearson r = 0.32).

Explore this scatter interactively →

Exploration