Across TCGA patient cohorts, PCP4 mutation is significantly associated with the immune_cell of many other genes, with 4 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible PCP4-associated genes across cancer lineages are Skeletal muscle, Erythrocytes, and Myocytes. Each is linked with PCP4 in more than 1 cancer types. Because this analysis shows association rather than direction, both PCP4-to-partner and partner-to-PCP4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PCP4→partner) and Y-score (partner→PCP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	Skeletal muscle →	+0.048	+3.038	.014	.018	3	2
SKCM	Erythrocytes →	+0.023	+2.845	.024	.034	3	1
SKCM	Myocytes →	+0.048	+2.201	.012	.034	3	1
SKCM	Th2 cells →	+0.231	+2.176	.009	.036	1	1

Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

Exploration

PCP4 survival (RNA) · tumor vs normal (RNA) · all PCP4 data types