PCNX4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PCNX4 mutation is significantly associated with the total protein of many other genes, with 33 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PCNX4-associated genes across cancer lineages are Akt_pT308, 14-3-3_beta, and Heregulin. Each is linked with PCNX4 in more than 3 cancer types. Because this analysis shows association rather than direction, both PCNX4-to-partner and partner-to-PCNX4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Akt_pT308 grouped by PCNX4-low versus PCNX4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PCNX4→partner) and Y-score (partner→PCNX4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECAkt_pT308 →+0.390+1.700.049.04034
UCEC14-3-3_beta →-0.080-2.195.011.00933
UCECHeregulin →-0.155-4.074<.001<.00132
UCECPDCD4 →-0.329-1.137.026.04132
UCECTFRC →+0.338+2.000.043.02932
UCECATM →-0.431-1.906.002.01532
Each partner links to its Q-omics profile. Showing the 6 strongest of 33 associations by consensus.

Akt_pT308 by PCNX4 expression — UCEC

Box plot of Akt_pT308 in PCNX4-low vs PCNX4-high samples in UCEC.

Explore this box plot interactively →

Exploration