Across TCGA patient cohorts, PCMTD2 RNA expression is significantly associated with the protein abundance of many other proteins, with 19,544 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PCMTD2-associated proteins across cancer lineages are ADNP, PSME2, and VEZF1. Each is linked with PCMTD2 in more than 6 cancer types. Because this analysis shows association rather than direction, both PCMTD2-to-partner and partner-to-PCMTD2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PCMTD2→partner) and Y-score (partner→PCMTD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	ADNP →	+0.399	+0.763	<.001	<.001	3	7
OV	PSME2 →	-0.493	-0.676	.001	.002	3	7
BRCA	VEZF1 →	+0.467	+0.617	<.001	.001	2	7
LSCC	RTF2 →	+0.366	+0.633	<.001	<.001	3	6
CCRCC	SEC24A →	-0.322	-0.368	<.001	<.001	3	6
GBM	CASP4 →	-0.426	-0.493	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 19,544 associations by consensus.

Exploration

PCMTD2 survival (RNA) · tumor vs normal (RNA) · all PCMTD2 data types