PCMT1

Across TCGA patient cohorts, PCMT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,537 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PCMT1-associated proteins across cancer lineages are VTA1, MAP3K4, and PPIL4. Each is linked with PCMT1 in more than 6 cancer types. Because this analysis shows association rather than direction, both PCMT1-to-partner and partner-to-PCMT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCMT1 versus VTA1 in OV, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PCMT1→partner) and Y-score (partner→PCMT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	VTA1 →	+0.414	+0.592	.002	.001	3	7
OV	MAP3K4 →	+0.297	+0.645	<.001	<.001	3	7
HNSC	PPIL4 →	+0.256	+0.608	<.001	<.001	3	7
LSCC	HBS1L →	+0.328	+0.509	<.001	<.001	3	6
OV	SCAF8 →	+0.184	+0.472	<.001	<.001	3	6
BRCA	FBXO30 →	+0.285	+0.527	<.001	.002	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,537 associations by consensus.

PCMT1 vs VTA1 — OV

Explore this scatter interactively →