PCIF1

Across TCGA patient cohorts, PCIF1 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,311 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PCIF1-associated proteins across cancer lineages are RBM12, RPRD1B, and SMC1A. Each is linked with PCIF1 in more than 7 cancer types. Because this analysis shows association rather than direction, both PCIF1-to-partner and partner-to-PCIF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCIF1 versus RBM12 in GBM, with a Pearson correlation of 0.52.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PCIF1→partner) and Y-score (partner→PCIF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	RBM12 →	+0.260	+0.441	<.001	<.001	3	8
GBM	RPRD1B →	+0.287	+0.444	.003	<.001	3	8
GBM	SMC1A →	+0.294	+0.383	<.001	<.001	3	8
GBM	ADNP →	+0.425	+0.481	<.001	<.001	3	8
GBM	SF3B3 →	+0.222	+0.470	<.001	<.001	3	7
GBM	HCFC1 →	+0.244	+0.493	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,311 associations by consensus.

PCIF1 vs RBM12 — GBM

Explore this scatter interactively →