PCGF5

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PCGF5 protein abundance is significantly associated with the RNA expression of many other genes, with 7,911 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible PCGF5-associated genes across cancer lineages are NUDT9P1, OLFML2B, and KDELR3. Each is linked with PCGF5 in more than 3 cancer types. Because this analysis shows association rather than direction, both PCGF5-to-partner and partner-to-PCGF5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCGF5 versus NUDT9P1 in UCEC, with a Pearson correlation of 0.30.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PCGF5→partner) and Y-score (partner→PCGF5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNUDT9P1 →+0.617+0.421<.001<.00134
OVOLFML2B →-1.289-0.488.002<.00134
BRCAKDELR3 →-1.066-0.734<.001.00233
HNSCCD48 →+0.928+0.554<.001<.00133
BRCAKIF12 →+1.246+0.496<.001.00133
UCECDDX60 →+0.605+0.252<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,911 associations by consensus.

PCGF5 vs NUDT9P1 — UCEC

Per-sample scatter of PCGF5 vs NUDT9P1 in UCEC (Pearson r = 0.30).

Explore this scatter interactively →

Exploration