PCDHGA11

Across TCGA patient cohorts, PCDHGA11 RNA expression is significantly associated with the RNA expression of many other genes, with 17,441 significant associations in total. THYM shows the largest number of these associations.

The most reproducible PCDHGA11-associated genes across cancer lineages are PCDHGB3, PCDHGA3, and PCDHGA12. Each is linked with PCDHGA11 in more than 31 cancer types. Because this analysis shows association rather than direction, both PCDHGA11-to-partner and partner-to-PCDHGA11 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCDHGA11 versus PCDHGB3 in MESO, with a Pearson correlation of 0.46.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PCDHGA11→partner) and Y-score (partner→PCDHGA11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
MESO	PCDHGB3 →	+1.204	+1.549	<.001	<.001	3	32
ACC	PCDHGA3 →	+1.212	+0.941	<.001	<.001	3	31
THYM	PCDHGA12 →	+2.503	+1.954	<.001	<.001	3	31
THYM	PCDHGA6 →	+1.503	+2.232	<.001	<.001	3	31
LAML	PCDHGB8P →	+1.108	+1.162	<.001	<.001	3	31
DLBC	KIAA1109 →	+1.303	+0.678	<.001	<.001	3	30

Each partner links to its Q-omics profile. Showing the 6 strongest of 17,441 associations by consensus.

PCDHGA11 vs PCDHGB3 — MESO

Explore this scatter interactively →