PCDHGA11

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PCDHGA11 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,384 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible PCDHGA11-associated proteins across cancer lineages are TAF7, AHNAK_S1782, and OLFML3. Each is linked with PCDHGA11 in more than 3 cancer types. Because this analysis shows association rather than direction, both PCDHGA11-to-partner and partner-to-PCDHGA11 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCDHGA11 versus TAF7 in GBM, with a Pearson correlation of 0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PCDHGA11→partner) and Y-score (partner→PCDHGA11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTAF7 →+0.258+0.799.001.00134
COADAHNAK_S1782 →+0.733+0.305<.001.00434
BRCAOLFML3 →+0.507+0.224<.001<.00133
GBMPFKFB2_S493 →-0.518-0.715.005.00233
BRCASEPTIN8 →+0.292+0.239<.001.00833
LSCCJUND →+0.289+0.530<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,384 associations by consensus.

PCDHGA11 vs TAF7 — GBM

Per-sample scatter of PCDHGA11 vs TAF7 in GBM (Pearson r = 0.37).

Explore this scatter interactively →

Exploration