PCDHB19P

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PCDHB19P RNA expression is significantly associated with the protein abundance of many other proteins, with 12,269 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PCDHB19P-associated proteins across cancer lineages are THSD7A, AGO1, and ATF7IP_S113. Each is linked with PCDHB19P in more than 3 cancer types. Because this analysis shows association rather than direction, both PCDHB19P-to-partner and partner-to-PCDHB19P results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PCDHB19P versus THSD7A in BRCA, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PCDHB19P→partner) and Y-score (partner→PCDHB19P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCATHSD7A →+0.631+0.148<.001.00534
UCECAGO1 →+0.258+0.478.001.00434
PDACATF7IP_S113 →+1.138+0.494.001<.00134
UCECSEMA4C_S717 →+0.847+0.749<.001<.00133
GBMWAS →-0.494-0.673<.001<.00133
HNSCYRDC_S37 →-0.510-0.526<.001.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,269 associations by consensus.

PCDHB19P vs THSD7A — BRCA

Per-sample scatter of PCDHB19P vs THSD7A in BRCA (Pearson r = 0.31).

Explore this scatter interactively →

Exploration