PCDHB13

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PCDHB13 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,842 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PCDHB13-associated proteins across cancer lineages are DBN1, VCL_Y822, and TOP1_S112. Each is linked with PCDHB13 in more than 3 cancer types. Because this analysis shows association rather than direction, both PCDHB13-to-partner and partner-to-PCDHB13 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PCDHB13→partner) and Y-score (partner→PCDHB13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACDBN1 →+0.425+0.847<.001<.00134
OVVCL_Y822 →+0.959+0.753.001.00533
HNSCTOP1_S112 →-0.729-0.723<.001<.00133
OVRPL5 →-0.181-0.826<.001<.00133
GBMRPS6 →-0.464-0.561<.001.00533
GBMRPS6KA1 →-0.325-0.702.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,842 associations by consensus.

Exploration