PCDH9-AS2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PCDH9-AS2 RNA expression is significantly associated with the protein abundance of many other proteins, with 6,466 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PCDH9-AS2-associated proteins across cancer lineages are SORBS3, NES, and NUMBL. Each is linked with PCDH9-AS2 in more than 3 cancer types. Because this analysis shows association rather than direction, both PCDH9-AS2-to-partner and partner-to-PCDH9-AS2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PCDH9-AS2→partner) and Y-score (partner→PCDH9-AS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACSORBS3 →+0.374+0.495<.001.00234
HNSCNES →+0.924+0.675<.001<.00133
GBMNUMBL →+0.307+0.779.002.00733
GBMPEAK1 →+0.220+0.944.002.00633
HNSCPHLDB1_S520 →+0.528+0.905.001<.00133
UCECZBTB46_S168 →+0.339+0.463.005.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,466 associations by consensus.

Exploration