PCDH9-AS1

Across TCGA patient cohorts, PCDH9-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,608 significant associations in total. STAD shows the largest number of these associations.

The most reproducible PCDH9-AS1-associated GO terms across cancer lineages are Endoplasmic reticulum to cytosol transport, Prostate gland morphogenesis, and Cellular response to interferon-alpha. Each is linked with PCDH9-AS1 in more than 4 cancer types. Because this analysis shows association rather than direction, both PCDH9-AS1-to-partner and partner-to-PCDH9-AS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endoplasmic reticulum to cytosol transport grouped by PCDH9-AS1-low versus PCDH9-AS1-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PCDH9-AS1→partner) and Y-score (partner→PCDH9-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Endoplasmic reticulum to cytosol transport →	+0.157	+0.033	<.001	.004	3	4
STAD	Prostate gland morphogenesis →	+0.086	+0.038	<.001	.001	3	4
STAD	Cellular response to interferon-alpha →	+0.081	+0.036	<.001	.002	3	4
ESCA	Regulation of cell-substrate adhesion →	+0.117	+0.033	<.001	.009	1	5
TGCT	Regulation of hormone secretion →	+0.034	+0.028	.001	.004	3	3
ESCA	Negative regulation of proteolysis involved in protein catabolic process →	+0.147	+0.027	<.001	.002	2	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,608 associations by consensus.

Endoplasmic reticulum to cytosol transport by PCDH9-AS1 expression — ESCA

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