PBLD

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PBLD mutation is significantly associated with the RNA expression of many other genes, with 1,345 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PBLD-associated genes across cancer lineages are MIR7845, MRPL32P1, and OR4A5. Each is linked with PBLD in more than 2 cancer types. Because this analysis shows association rather than direction, both PBLD-to-partner and partner-to-PBLD results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR7845 grouped by PBLD-low versus PBLD-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PBLD→partner) and Y-score (partner→PBLD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCMIR7845 →+0.615+3.944<.001.00733
BLCAMRPL32P1 →+0.109+4.147<.001.00932
BLCAOR4A5 →+0.058+5.040<.001.00232
BLCAPHKG1P2 →+0.060+5.307<.001.00132
CESCOR6K2 →+0.031+5.252<.001.00232
SKCMPRC1 →+0.764+3.491.003.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,345 associations by consensus.

MIR7845 by PBLD expression — CESC

Box plot of MIR7845 in PBLD-low vs PBLD-high samples in CESC.

Explore this box plot interactively →

Exploration