PBDC1

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, PBDC1 mass-spec protein differs between tumor and matched normal tissue in 6 of 18 cancer types tested, making tumor–normal expression one of PBDC1’s most consistent transcriptional readouts.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where PBDC1 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types PBDC1 is over-expressed in tumor, although a few such as HNSC show the opposite, repressed pattern.

CCRCC, LUAD, and COAD are the cancer types where PBDC1 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in PBDC1 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
CCRCCMaleII,III,IV+0.173<.00110view →
LUADFemaleII,III,IV+0.393<.0019view →
COADFemaleAll+0.227<.0019view →
LSCCMaleAll+0.152<.0016view →
PDACAllAll+0.193.0024view →
HNSCAllIV−0.141.0282view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 6 strongest of 6 lineages.

PBDC1–CCRCC

Tumor-vs-normal mass-spec protein box plot for PBDC1 in CCRCC.

Open the CCRCC breakdown →

Exploration