PARVA

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PARVA mutation is significantly associated with the total protein of many other genes, with 29 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PARVA-associated genes across cancer lineages are Ku80, 14-3-3_beta, and EGFR. Each is linked with PARVA in more than 1 cancer types. Because this analysis shows association rather than direction, both PARVA-to-partner and partner-to-PARVA results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PARVA→partner) and Y-score (partner→PARVA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECKu80 →+0.194+1.498.041.03632
UCEC14-3-3_beta →-0.104-2.432.010.01831
UCECEGFR →-0.214-3.295<.001.00931
UCECERK2 →+0.213+2.415.006.00331
UCECFASN →+0.405+2.000.010.03031
UCECFoxM1 →+0.231+2.415.026.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 29 associations by consensus.

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