PALMD

Across TCGA patient cohorts, PALMD protein abundance is significantly associated with the RNA expression of many other genes, with 19,442 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible PALMD-associated genes across cancer lineages are FOXM1, CDCA8, and TROAP. Each is linked with PALMD in more than 6 cancer types. Because this analysis shows association rather than direction, both PALMD-to-partner and partner-to-PALMD results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PALMD versus FOXM1 in LUAD, with a Pearson correlation of -0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PALMD→partner) and Y-score (partner→PALMD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	FOXM1 →	-1.009	-0.370	<.001	<.001	3	7
LUAD	CDCA8 →	-0.977	-0.438	<.001	<.001	3	7
GBM	TROAP →	-1.019	-0.540	<.001	<.001	3	7
GBM	ESPL1 →	-0.914	-0.524	<.001	<.001	3	7
OV	MTFR2 →	-0.718	-0.423	.003	.007	3	7
BRCA	IGFBP7 →	+0.984	+0.717	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 19,442 associations by consensus.

PALMD vs FOXM1 — LUAD

Explore this scatter interactively →