PALMD

Across TCGA cell cohorts, PALMD RNA expression is significantly associated with the go_rna of many other GO terms, with 2,659 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible PALMD-associated GO terms across cancer lineages are Cellular response to jasmonic acid stimulus, Response to jasmonic acid, and Response to prostaglandin. Each is linked with PALMD in more than 6 cancer types. Because this analysis shows association rather than direction, both PALMD-to-partner and partner-to-PALMD results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cellular response to jasmonic acid stimulus grouped by PALMD-low versus PALMD-high in LUNG_NSCLC_LUSC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PALMD→partner) and Y-score (partner→PALMD) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	Cellular response to jasmonic acid stimulus →	+1.560	+1.502	<.001	.005	3	7
LUNG_NSCLC_LUSC	Response to jasmonic acid →	+1.560	+1.502	<.001	.005	3	7
LUNG_NSCLC_LUSC	Response to prostaglandin →	+0.149	+1.505	<.001	.005	3	7
SOFT_TISSUE	Negative regulation of myoblast fusion →	+0.076	+1.626	<.001	.003	3	7
LUNG_NSCLC_LUSC	Progesterone metabolic process →	+0.467	+1.439	<.001	.004	3	6
BONE	L-alanine import across plasma membrane →	-0.195	-1.459	<.001	.002	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,659 associations by consensus.

Cellular response to jasmonic acid stimulus by PALMD expression — LUNG_NSCLC_LUSC

Explore this box plot interactively →