PAK3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PAK3 mutation is significantly associated with the total protein of many other genes, with 48 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PAK3-associated genes across cancer lineages are eIF4E, Cyclin-B1, and eEF2. Each is linked with PAK3 in more than 2 cancer types. Because this analysis shows association rather than direction, both PAK3-to-partner and partner-to-PAK3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by PAK3-low versus PAK3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PAK3→partner) and Y-score (partner→PAK3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.171+2.713.009.00333
UCECCyclin-B1 →+0.700+2.502<.001.00133
UCECeEF2 →+0.332+2.807.003.00232
UCECMEK1 →+0.382+2.999<.001<.00132
UCECp62 Lck ligand →+0.293+1.594.004.02132
UCECPCNA →+0.253+2.115<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 48 associations by consensus.

eIF4E by PAK3 expression — UCEC

Box plot of eIF4E in PAK3-low vs PAK3-high samples in UCEC.

Explore this box plot interactively →

Exploration