PADI6

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PADI6 mutation is significantly associated with the total protein of many other genes, with 44 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PADI6-associated genes across cancer lineages are AMPK_pT172, Rictor_pT1135, and TAZ. Each is linked with PADI6 in more than 2 cancer types. Because this analysis shows association rather than direction, both PADI6-to-partner and partner-to-PADI6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, AMPK_pT172 grouped by PADI6-low versus PADI6-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PADI6→partner) and Y-score (partner→PADI6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMAMPK_pT172 →+0.432+2.000.003.03132
SKCMRictor_pT1135 →-0.140-1.982.042.03132
SKCMTAZ →+0.188+3.182.008.00932
SKCMASNS →+0.742+3.321<.001.00923
SKCME-Cadherin →-1.059-3.169.006.01832
UCECNDRG1_pT346 →-0.433-1.584.014.01932
Each partner links to its Q-omics profile. Showing the 6 strongest of 44 associations by consensus.

AMPK_pT172 by PADI6 expression — SKCM

Box plot of AMPK_pT172 in PADI6-low vs PADI6-high samples in SKCM.

Explore this box plot interactively →

Exploration