PACSIN3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PACSIN3 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,595 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PACSIN3-associated proteins across cancer lineages are PACSIN3_S319, PACSIN3_S354, and ATP13A1. Each is linked with PACSIN3 in more than 4 cancer types. Because this analysis shows association rather than direction, both PACSIN3-to-partner and partner-to-PACSIN3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PACSIN3 versus PACSIN3_S319 in LSCC, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PACSIN3→partner) and Y-score (partner→PACSIN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPACSIN3_S319 →+0.884+0.849<.001<.00135
LSCCPACSIN3_S354 →+0.796+1.001<.001<.00135
UCECATP13A1 →-0.382-1.061.003.00634
UCECCAPRIN1 →+0.234+1.369<.001<.00134
LSCCCTNNA1 →+0.298+0.795<.001<.00134
BRCADHX15 →+0.169+0.819.002.00234
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,595 associations by consensus.

PACSIN3 vs PACSIN3_S319 — LSCC

Per-sample scatter of PACSIN3 vs PACSIN3_S319 in LSCC (Pearson r = 0.43).

Explore this scatter interactively →

Exploration