PABPC5-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, PABPC5-AS1 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of PABPC5-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in thyroid carcinoma (THCA), where PABPC5-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types PABPC5-AS1 is over-expressed in tumor, although a few such as THCA and UCEC show the opposite, repressed pattern.

THCA, UCEC, and KICH are the cancer types where PABPC5-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in PABPC5-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
THCAMaleII,III,IV−0.473<.0018view →
UCECAllAll−0.344<.0016view →
KICHAllII,III,IV−0.170.0066view →
KIRCAllII,III,IV−0.114.0016view →
KIRPFemaleII,III,IV+0.387.0193view →
HNSCAllIII,IV+0.068.0092view →
LIHCAllAll+0.021.0262view →
BRCAFemaleAll−0.075.0191view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

PABPC5-AS1–THCA

Tumor-vs-normal expression box plot for PABPC5-AS1 RNA in THCA.

Open the THCA breakdown →

Exploration