PABPC3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PABPC3 mutation is significantly associated with the RNA expression of many other genes, with 93 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible PABPC3-associated genes across cancer lineages are G6PC, CXorf51A, and TAFA1. Each is linked with PABPC3 in more than 1 cancer types. Because this analysis shows association rather than direction, both PABPC3-to-partner and partner-to-PABPC3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, G6PC grouped by PABPC3-low versus PABPC3-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PABPC3→partner) and Y-score (partner→PABPC3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKING6PC →+0.006+5.415<.001.00431
LUNG_NSCLC_LUADCXorf51A →+0.076+4.887<.001.00931
BLOOD_LeukemiaTAFA1 →+0.509+4.034.003.00131
BLOOD_LeukemiaNKAIN3 →+0.244+3.007.007.00731
OVARYVWA5B1 →+0.029+3.263<.001.00631
LARGE_INTESTINEMTFMT →+0.492+2.502.005.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 93 associations by consensus.

G6PC by PABPC3 expression — SKIN

Box plot of G6PC in PABPC3-low vs PABPC3-high samples in SKIN.

Explore this box plot interactively →

Exploration