PABPC1L

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PABPC1L mutation is significantly associated with the RNA expression of many other genes, with 1,594 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PABPC1L-associated genes across cancer lineages are WWC2-AS1, CPT2, and TYW3. Each is linked with PABPC1L in more than 1 cancer types. Because this analysis shows association rather than direction, both PABPC1L-to-partner and partner-to-PABPC1L results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, WWC2-AS1 grouped by PABPC1L-low versus PABPC1L-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PABPC1L→partner) and Y-score (partner→PABPC1L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMWWC2-AS1 →+0.126+3.408<.001.00932
UCECCPT2 →+0.420+2.329.003.00332
UCECTYW3 →+0.457+1.895<.001.00132
UCECENTR1 →+0.371+3.021.001<.00132
UCECNOLC1 →+0.437+2.243.007.00532
UCECDHRS13 →+0.534+2.254.006.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,594 associations by consensus.

WWC2-AS1 by PABPC1L expression — SKCM

Box plot of WWC2-AS1 in PABPC1L-low vs PABPC1L-high samples in SKCM.

Explore this box plot interactively →

Exploration