OTP

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, OTP RNA expression is significantly associated with the go_rna of many other GO terms, with 1,292 significant associations in total. PANCREAS shows the largest number of these associations.

The most reproducible OTP-associated GO terms across cancer lineages are Regulation of DNA-templated transcription initiation, Regulation of double-strand break repair, and Positive regulation of double-strand break repair. Each is linked with OTP in more than 5 cancer types. Because this analysis shows association rather than direction, both OTP-to-partner and partner-to-OTP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of DNA-templated transcription initiation grouped by OTP-low versus OTP-high in PANCREAS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (OTP→partner) and Y-score (partner→OTP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASRegulation of DNA-templated transcription initiation →+0.081+0.052<.001<.00136
OVARYRegulation of double-strand break repair →+0.046+0.020<.001.00836
OVARYPositive regulation of double-strand break repair →+0.053+0.021<.001.00436
BREASTRegulation of DNA repair →+0.046+0.103<.001.00836
LUNG_SCLCEstablishment of protein localization to organelle →+0.053+0.950<.001.00336
LUNG_SCLCRegulation of centrosome duplication →+0.094+0.516<.001.00335
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,292 associations by consensus.

Regulation of DNA-templated transcription initiation by OTP expression — PANCREAS

Box plot of Regulation of DNA-templated transcription initiation in OTP-low vs OTP-high samples in PANCREAS.

Explore this box plot interactively →

Exploration