OSGEP

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, OSGEP RNA expression is significantly associated with the go_rna of many other GO terms, with 3,310 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible OSGEP-associated GO terms across cancer lineages are DNA recombination, Endothelial to hematopoietic transition, and Double-strand break repair. Each is linked with OSGEP in more than 14 cancer types. Because this analysis shows association rather than direction, both OSGEP-to-partner and partner-to-OSGEP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DNA recombination grouped by OSGEP-low versus OSGEP-high in UPPER_AERODIGESTIVE_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (OSGEP→partner) and Y-score (partner→OSGEP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTDNA recombination →+0.088+1.340<.001<.001315
BONEEndothelial to hematopoietic transition →+0.110+1.085.001<.001314
URINARY_TRACTDouble-strand break repair →+0.062+1.028<.001<.001313
UPPER_AERODIGESTIVE_TRACTTelomere organization →+0.089+1.303<.001<.001313
BONEDNA-templated DNA replication maintenance of fidelity →+0.096+0.748.008<.001313
BONEReplication fork processing →+0.128+0.761.006.002313
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,310 associations by consensus.

DNA recombination by OSGEP expression — UPPER_AERODIGESTIVE_TRACT

Box plot of DNA recombination in OSGEP-low vs OSGEP-high samples in UPPER_AERODIGESTIVE_TRACT.

Explore this box plot interactively →

Exploration