OSCAR

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, OSCAR protein abundance is significantly associated with the RNA expression of many other genes, with 5,021 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible OSCAR-associated genes across cancer lineages are CD300A, LRPPRC, and MEFV. Each is linked with OSCAR in more than 3 cancer types. Because this analysis shows association rather than direction, both OSCAR-to-partner and partner-to-OSCAR results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, OSCAR versus CD300A in GBM, with a Pearson correlation of 0.72.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OSCAR→partner) and Y-score (partner→OSCAR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCD300A →+1.414+1.024.001.00234
GBMLRPPRC →-0.631-1.066<.001.00233
GBMMEFV →+1.521+1.321.001<.00133
GBMFAM20A →+0.923+0.833<.001<.00133
GBMHLX →+0.598+0.897<.001.00233
BRCATMEM255B →+0.871+0.732<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,021 associations by consensus.

OSCAR vs CD300A — GBM

Per-sample scatter of OSCAR vs CD300A in GBM (Pearson r = 0.72).

Explore this scatter interactively →

Exploration