OR52B2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, OR52B2 mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible OR52B2-associated genes across cancer lineages are KCND3, UTF1, and TRIM49B. Each is linked with OR52B2 in more than 1 cancer types. Because this analysis shows association rather than direction, both OR52B2-to-partner and partner-to-OR52B2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KCND3 grouped by OR52B2-low versus OR52B2-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OR52B2→partner) and Y-score (partner→OR52B2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEKCND3 →+0.306+3.519.007.00731
LARGE_INTESTINEUTF1 →+0.011+3.217.006.00631
LARGE_INTESTINETRIM49B →+0.232+3.217<.001.00631
LARGE_INTESTINEOR4A47 →+0.012+3.700<.001.00931
LARGE_INTESTINELBHD2 →+0.092+3.103<.001.00431
LARGE_INTESTINEGSC2 →+0.110+3.103<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

KCND3 by OR52B2 expression — LARGE_INTESTINE

Box plot of KCND3 in OR52B2-low vs OR52B2-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration