OR52A5

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, OR52A5 mutation is significantly associated with the RNA expression of many other genes, with 2,456 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible OR52A5-associated genes across cancer lineages are SNRNP25, ATP5MC1, and MTND4LP24. Each is linked with OR52A5 in more than 2 cancer types. Because this analysis shows association rather than direction, both OR52A5-to-partner and partner-to-OR52A5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNRNP25 grouped by OR52A5-low versus OR52A5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OR52A5→partner) and Y-score (partner→OR52A5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSNRNP25 →+0.467+2.882.004.00133
LUSCATP5MC1 →+0.518+3.471<.001.00233
STADMTND4LP24 →+0.195+4.462.001<.00133
SKCMPPP2R2D →+0.419+3.832<.001<.00133
SKCMHIGD1A →+0.502+2.926.001<.00133
LGGRNF11P2 →+0.101+5.327<.001.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,456 associations by consensus.

SNRNP25 by OR52A5 expression — UCEC

Box plot of SNRNP25 in OR52A5-low vs OR52A5-high samples in UCEC.

Explore this box plot interactively →

Exploration