OR4F29

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, OR4F29 RNA expression is significantly associated with the protein abundance of many other proteins, with 59 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible OR4F29-associated proteins across cancer lineages are SLC9A1_S783, SMYD5, and SNTB1_S219. Each is linked with OR4F29 in more than 1 cancer types. Because this analysis shows association rather than direction, both OR4F29-to-partner and partner-to-OR4F29 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, OR4F29 versus SLC9A1_S783 in BRCA, with a Pearson correlation of -0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (OR4F29→partner) and Y-score (partner→OR4F29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASLC9A1_S783 →-1.884-0.080.005.00931
BRCASMYD5 →-0.280-0.018.005.00831
BRCASNTB1_S219 →+0.669+0.020<.001.00531
BRCASPEG_S390 →+0.998+0.022.006.00631
BRCATGFB1I1_S68 →+0.865+0.021.009.00431
BRCATOP2B_S1581 →+0.612+0.019<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 59 associations by consensus.

OR4F29 vs SLC9A1_S783 — BRCA

Per-sample scatter of OR4F29 vs SLC9A1_S783 in BRCA (Pearson r = -0.42).

Explore this scatter interactively →

Exploration