OR4C3

RNA expression — cross-omics
Cross-omicsRNA → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, OR4C3 RNA expression is significantly associated with the mutation status of many other genes, with 20 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible OR4C3-associated genes across cancer lineages are USPL1, PPP1R3A, and TCF3. Each is linked with OR4C3 in more than 1 cancer types. Because this analysis shows association rather than direction, both OR4C3-to-partner and partner-to-OR4C3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, USPL1 grouped by OR4C3-low versus OR4C3-high in BLOOD_Leukemia.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OR4C3→partner) and Y-score (partner→OR4C3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaUSPL1 →+4.984+0.012.002<.00131
BLOOD_LeukemiaPPP1R3A →+3.569+0.006.009<.00131
BLOOD_LeukemiaTCF3 →+3.569+0.006.009<.00131
BREASTNUP155 →+3.781+0.028.009<.00131
BREASTGPR158 →+4.196+0.034.006<.00131
BREASTGPRIN2 →+4.781+0.042.003<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 20 associations by consensus.

USPL1 by OR4C3 expression — BLOOD_Leukemia

Box plot of USPL1 in OR4C3-low vs OR4C3-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration