OPN1SW

Across TCGA cell cohorts, OPN1SW RNA expression is significantly associated with the go_rna of many other GO terms, with 3,276 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible OPN1SW-associated GO terms across cancer lineages are Light absorption, Absorption of visible light, and Synaptic vesicle recycling. Each is linked with OPN1SW in more than 18 cancer types. Because this analysis shows association rather than direction, both OPN1SW-to-partner and partner-to-OPN1SW results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Light absorption grouped by OPN1SW-low versus OPN1SW-high in LIVER.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (OPN1SW→partner) and Y-score (partner→OPN1SW) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIVER	Light absorption →	+0.244	+0.351	<.001	.003	3	19
LIVER	Absorption of visible light →	+0.244	+0.351	<.001	.003	3	19
URINARY_TRACT	Synaptic vesicle recycling →	+0.090	+0.117	<.001	<.001	3	10
SKIN	Retrograde transport, endosome to Golgi →	+0.065	+0.357	<.001	<.001	3	9
UPPER_AERODIGESTIVE_TRACT	Protein depolymerization →	+0.120	+0.150	<.001	<.001	3	9
UPPER_AERODIGESTIVE_TRACT	Negative regulation of type I interferon production →	+0.083	+0.088	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,276 associations by consensus.

Light absorption by OPN1SW expression — LIVER

Explore this box plot interactively →