OPLAH

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, OPLAH mutation is significantly associated with the RNA expression of many other genes, with 4,213 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible OPLAH-associated genes across cancer lineages are CENPE, ZWILCH, and SKA1. Each is linked with OPLAH in more than 4 cancer types. Because this analysis shows association rather than direction, both OPLAH-to-partner and partner-to-OPLAH results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CENPE grouped by OPLAH-low versus OPLAH-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OPLAH→partner) and Y-score (partner→OPLAH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADCENPE →+0.708+3.595<.001.00135
SKCMZWILCH →+0.525+2.106.007.00334
UCECSKA1 →+0.695+3.828<.001<.00134
UCECC18orf54 →+0.753+2.392<.001<.00134
SKCMDEPDC1 →+0.721+2.093.004.00334
UCECSPAG5 →+0.629+2.392.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,213 associations by consensus.

CENPE by OPLAH expression — COAD

Box plot of CENPE in OPLAH-low vs OPLAH-high samples in COAD.

Explore this box plot interactively →

Exploration