OPALIN

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, OPALIN mutation is significantly associated with the total protein of many other genes, with 10 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible OPALIN-associated genes across cancer lineages are mTOR_pS2448, p38-MAPK_pT180_Y182, and PAI-1. Each is linked with OPALIN in more than 1 cancer types. Because this analysis shows association rather than direction, both OPALIN-to-partner and partner-to-OPALIN results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OPALIN→partner) and Y-score (partner→OPALIN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECmTOR_pS2448 →-0.215-3.169.008.02031
UCECp38-MAPK_pT180_Y182 →-0.837-3.169<.001.01931
UCECPAI-1 →+0.388+3.000.039.03631
UCECPDCD4 →-1.109-3.169<.001.01831
UCECPKC-b-II_pS660 →-0.365-3.169.016.02031
UCECp62 Lck ligand →+0.626+3.169<.001.02021
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

Exploration