OMG

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, OMG mutation is significantly associated with the total protein of many other genes, with 23 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible OMG-associated genes across cancer lineages are EGFR_pY1068, FASN, and Myosin-IIa_pS1943. Each is linked with OMG in more than 1 cancer types. Because this analysis shows association rather than direction, both OMG-to-partner and partner-to-OMG results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by OMG-low versus OMG-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (OMG→partner) and Y-score (partner→OMG) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEGFR_pY1068 →-0.290-3.169.016.01931
UCECFASN →+0.481+2.459.011.02031
UCECMyosin-IIa_pS1943 →+0.249+2.472.012.01131
UCECMyosin-IIa →+0.242+3.329.012.00531
UCECp38-MAPK_pT180_Y182 →-0.500-3.571.021.00231
UCECPDCD4 →-0.724-2.459.001.02031
Each partner links to its Q-omics profile. Showing the 6 strongest of 23 associations by consensus.

EGFR_pY1068 by OMG expression — UCEC

Box plot of EGFR_pY1068 in OMG-low vs OMG-high samples in UCEC.

Explore this box plot interactively →

Exploration